Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918759.1_cds_XP_016468135.1_60808
CDS Infomation

[gene=LOC107790695] [db_xref=GeneID:107790695] [protein=putative late blight resistance protein homolog R1B-17 isoform X2] [protein_id=XP_016468135.1] [location=complement(join(43925..43984,44067..45422,46206..46265))] [gbkey=CDS]
Sequence

ATGACTGATTATTATACGTGGCAGTTACGTCTGCTTAAAAAAGCTGCCCTGGCGCCGCAG
CATCTTACTTCGGATGATAACGAAGTTGGTGTTATTAAGGAGGAAGCGCAAAAAATGATC
ATGCCACCCATTGAAGGACCAGAGGATCGAGAGAACGAAGTTGTTGGTGTTGTTAAGAAG
GAAGCACAAAAAGTGATCTTGCCACCCATTGAAGGACCAGAGGATCAAGATAACGAAGTT
GTTGGTGTTATTAAGGAGGAAGCACAAAAAGTGATCATGCGACTCATTGAAGGACCAGAG
GATCTAAATATTGTTCCCATTGTGGGTATGATTGGACTTGGCAAAACCACACTTGCACGA
AAAATCTATTATGATCCTCAAATTTCAGGCGAGTTTCCGAACAAGATTTGGATCAATGTC
GGCCAGTCATACGACAAAAAGAAGATATTTCTTAATATTCTCGGAGGGCTCATGAAACGA
AGCATCGAAGAATATCGATATAAGGAAGATGTTTGGGAGACAGCAGTTGTAAATTCTGTC
AAGGAAGTTTTTCCAGAAAACAAAAAAGGCCACCGAATCATGATGACCACTCGCCTAGAA
TACGTGGCTACTAATGCTAATGAGGATCCTCATTATCTGGAATTTCTGACTCCAAATGAA
AGTTTCAAGTTGTTGGAACTGAAAGTTTTTGGCCGGAGCAGATGTCCTGATGACTTACTA
GTATTTGGAAAAAGCATTGCATCAAAATGTAGTGGATTGCCACTTTCGCTAGTGGTAATT
GCAAAAAAATTAAAACATCGTAAGGACAGAAGTACTTGGAAACTAATTGAAAAAGATGTG
TGGCATCCTCTTTTAAATGAAGATGACCCTGAAAGCTGCTTGGAAGCAGTAAAGTTGAGT
TACGATCACCTGTCCCATGAAATGAAGGTGTGCTTCTTGTATTGTGGTGCTTTTCCTCAC
GGCTTTGATATCCCTGCTTGGAAATTGATTCGCTTGTGGATCGCTGAGCGCTTGATAAGG
CCCGAACCGCCATACACGCTTGAGGAGACAGCAGAGCGTTATTTGAACAACCTTGTTGGT
AGGAACTTGCTGATGGTGAAGAAGAAGAGTTTTGATGGCCAAATAAAAACATGTCACATT
CACGACTTGTTGCATGAGTTCTGCAAAGCAGAGGCTAATAGAAAAAGGATTCTTCAAGAA
GTATGTCCAACACCCCACAAGGATATCCTTACGAGACAAGCAGTGTATACTTCTCAAGGA
TTGTGCATTCAACCCTCTGTTCTACACGATTTTCTCTCGGCAAAACCAGTTGCTGAGCCT
GTTAGATCTTTCTACTGTTTTTCCTCTAAACAAACACAAACCAAGTTGTCGTCTGATGAC
ATCCAACTCTTCGAGAAAGCATTTCCATTAATCAGGGTGACTTCAATGACCTTCCAGTGG
AAGTTGGTAGATTTTGGAATTTACAAACTCTTATAG

Peptide Sequence

PEP ID

XP_016468135.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1B-17 isoform X2 [Nicotiana tabacum]
Sequence

MTDYYTWQLRLLKKAALAPQHLTSDDNEVGVIKEEAQKMIMPPIEGPEDRENEVVGVVKK
EAQKVILPPIEGPEDQDNEVVGVIKEEAQKVIMRLIEGPEDLNIVPIVGMIGLGKTTLAR
KIYYDPQISGEFPNKIWINVGQSYDKKKIFLNILGGLMKRSIEEYRYKEDVWETAVVNSV
KEVFPENKKGHRIMMTTRLEYVATNANEDPHYLEFLTPNESFKLLELKVFGRSRCPDDLL
VFGKSIASKCSGLPLSLVVIAKKLKHRKDRSTWKLIEKDVWHPLLNEDDPESCLEAVKLS
YDHLSHEMKVCFLYCGAFPHGFDIPAWKLIRLWIAERLIRPEPPYTLEETAERYLNNLVG
RNLLMVKKKSFDGQIKTCHIHDLLHEFCKAEANRKRILQEVCPTPHKDILTRQAVYTSQG
LCIQPSVLHDFLSAKPVAEPVRSFYCFSSKQTQTKLSSDDIQLFEKAFPLIRVTSMTFQW
KLVDFGIYKLL

Transcript Sequence

Gene sequence data has not been registered.